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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949738.1_cds_XP_016490508.1_80925
CDS Infomation

[gene=LOC107810268] [db_xref=GeneID:107810268] [protein=aspartic proteinase PCS1-like] [protein_id=XP_016490508.1] [location=38627..39949] [gbkey=CDS]
Sequence

ATGAAACTTCTCTTGTTTTTCAGAATATTTCTGAACTTCTTGTTCTTACTGTACCAACCC
CTGAAATGTTTTTCCTCTACCACTTTCAACACCCAAAATAATTCATCAACGTTAATTTTG
GCACTAAAAACTCAAGAAATGCCATCTGGGTCCTTCCCTAGATCTTCAAACAAGCTTCCA
TTTACACACAATGTAACTCTTACAGTTTCTCTTTCAGTAGGTACACCTCCACAGAATGTT
ACAATGGTACTTGACACAGGCAGTGAACTTTCATGGCTACATTGCAACTCAACCCGAATC
AACCAACCCGTTTTCAACCCGAACCGGTCAGTTTCTTACCGACCCGTTTCTTGCTCATCA
CCAACTTGTACCACCCGAACACAAGATTTCTCTATACCAGCTTCTTGTGACTCCAAGAAT
TTATGTCATGCTGTGCTTTCTTATGCAGATGCTTCATCTTCTGAAGGAAATTTAGCTATG
GATACGTTTAATATTGGGGGGTCGAATTTTTCGGGTACTATATTCGGGTGCATGGATTCG
GGTTTCAGTAGTAATTCGGATGAAGATTCAAAGACAACCGGGTTAATGGGTATGAACCGT
GGAGCACTCTCTTTTGTTTCACAAATGGGGTTTAAGAAGTTTTCGTATTGCATTTCGGGT
TCGGATTTTAACGGCGTTTTACTTCTTGGTGAGTCTAATTTTACTTGGGTTTTGCCGTTA
AATTACACGCCGTTGGTGGAAATTTCACTTCCTTTGCCTTATTTTGATAGAGTAGCATAT
ACTGTTCAACTTGAAGGTATTAAAGTTTCGGATAAATTACTTTCAATACCAAAATCTGTA
TTTGTACCCGACCATACCGGAGCGGGTCAAACCATGGTTGATTCGGGTACCCAATTTACA
TTCCTACTTGGTCCAGCTTACACTGTGCTAAGGAATGAGTTTTTGAATCAAACTAAGGCA
ACTCTTAAGGTTCTTGAGGATCAAGATTTTGTTTTTCAAGGTGCAATGGACTTGTGTTAT
CGTGTACCTGTTAACGCAACGAAGTTACCTGCATTACCATCGGTGAGTTTAGTATTTCGG
GGGGCGGAAATAACGGTTTTGGGCGAGCGATTGTTGTATCGAGTACCCGGTGAAATTCGG
GAAAATGACTCGATACATTGCTTCACTTTTGGAAATTCCGAGCTACTAGCTATCGAGGCG
TATATTATTGGTCACCATCATCAGCAAAATGTGTGGGTGGAGTATGATCTTGAAAAATCT
CGCATTGGTTTTGCTCAAGTACGGTGTGATGTAGCGAGTCAAAGATTTGGTCTCTATCGT
TAA

Peptide Sequence

PEP ID

XP_016490508.1
PEP Infomation

PREDICTED: aspartic proteinase PCS1-like [Nicotiana tabacum]
Sequence

MKLLLFFRIFLNFLFLLYQPLKCFSSTTFNTQNNSSTLILALKTQEMPSGSFPRSSNKLP
FTHNVTLTVSLSVGTPPQNVTMVLDTGSELSWLHCNSTRINQPVFNPNRSVSYRPVSCSS
PTCTTRTQDFSIPASCDSKNLCHAVLSYADASSSEGNLAMDTFNIGGSNFSGTIFGCMDS
GFSSNSDEDSKTTGLMGMNRGALSFVSQMGFKKFSYCISGSDFNGVLLLGESNFTWVLPL
NYTPLVEISLPLPYFDRVAYTVQLEGIKVSDKLLSIPKSVFVPDHTGAGQTMVDSGTQFT
FLLGPAYTVLRNEFLNQTKATLKVLEDQDFVFQGAMDLCYRVPVNATKLPALPSVSLVFR
GAEITVLGERLLYRVPGEIRENDSIHCFTFGNSELLAIEAYIIGHHHQQNVWVEYDLEKS
RIGFAQVRCDVASQRFGLYR

Transcript Sequence

Gene sequence data has not been registered.